Reference
Last updated on 2026-08-27 | Edit this page
GPU Hardware on Sagehen HPC
GPU Partition Overview
| GPU Model | Architecture | VRAM | FP32 (TFLOPS) | Tensor Cores | Quantity |
|---|---|---|---|---|---|
| NVIDIA A100 | Ampere | 80 GB HBM2e | 19.5 | Yes (3rd gen) | 4 |
| NVIDIA L40S | Ada Lovelace | 48 GB GDDR6 | 91.6 | Yes (4th gen) | 4 |
| NVIDIA RTX PRO 6000 | Blackwell | 96 GB GDDR7 ECC | ~125 | Yes (5th gen) | 2 |
Total: 10 GPUs (confirmed by Andrew Wilson, May 2026).
SLURM GPU Commands
Requesting GPUs
BASH
# Request any available GPU
#SBATCH --partition=gpu
#SBATCH --gres=gpu:1
# Request a specific GPU type
#SBATCH --gres=gpu:a100:1
#SBATCH --gres=gpu:l40s:1
#SBATCH --gres=gpu:l40s:1
# Request multiple GPUs
#SBATCH --gres=gpu:a100:2
# Interactive GPU session
srun --partition=gpu --gres=gpu:1 --time=01:00:00 --pty bash
Monitoring GPU Jobs
BASH
# Check GPU utilization on your allocated node
nvidia-smi
# Continuous monitoring (updates every 2 seconds)
nvidia-smi -l 2
# Compact monitoring output
nvidia-smi --query-gpu=index,name,utilization.gpu,memory.used,memory.total --format=csv
# Check your running jobs
squeue -u $USER
# Check GPU partition availability
sinfo -p gpu --Node -o "%N %G %C %m %t"
CUDA Module Commands
Python GPU Frameworks
CUDA C/C++
BASH
# Compile CUDA code
nvcc -o my_program my_program.cu
# Compile with specific architecture
nvcc -arch=sm_80 -o my_program my_program.cu # A100
nvcc -arch=sm_89 -o my_program my_program.cu # L40S
nvcc -arch=sm_89 -o my_program my_program.cu # L40S
nvcc -arch=sm_120 -o my_program my_program.cu # RTX PRO 6000 (Blackwell)
Common SLURM Batch Script Template
BASH
#!/bin/bash
#SBATCH --job-name=gpu_job
#SBATCH --partition=gpu
#SBATCH --gres=gpu:a100:1
#SBATCH --cpus-per-task=8
#SBATCH --mem=32G
#SBATCH --time=04:00:00
#SBATCH --output=gpu_job_%j.out
#SBATCH --error=gpu_job_%j.err
# Load modules
module load cuda
module load miniconda3
# Activate conda environment
conda activate my_gpu_env
# Run GPU code
python train_model.py
Storage Recommendations for GPU Workloads
| Storage | Path | Use For | Speed |
|---|---|---|---|
| Home | /rhome/<myusername> |
Code, scripts, configs | Standard |
| Big Data | /bigdata/lab/<labname> |
Datasets, model checkpoints | Standard |
| Scratch | /scratch/$USER/$SLURM_JOB_ID |
Training data I/O, temp files | Fast (SSD) |
| Tmpfs | /tmpfs/$USER/$SLURM_JOB_ID |
Fastest I/O, small datasets | Fastest (RAM) |
Troubleshooting
| Issue | Solution |
|---|---|
nvidia-smi not found |
Load CUDA module: module load cuda
|
| No GPU detected in PyTorch | Ensure --gres=gpu:N in SLURM script |
| CUDA out of memory | Reduce batch size, use mixed precision, or request a larger GPU |
| CUDA version mismatch | Match PyTorch/TF CUDA version with loaded module |
| Job pending for GPU | Check sinfo -p gpu for availability; consider using
L40S |
Contact
For GPU-related questions or issues, contact the HPC team at its-hpc@pomona.edu.